A model for predicting the absence of post-COVID gastrointestinal disorders in children who have had COVID-19 infection

INFECTIOUS DISEASES

Keywords:
COVID-19 children post-covid period functional gastrointestinal disorders prognosis COVID-19 дети постковидный период функциональные расстройства ЖКТ прогноз

Abstract

Introduction.After recovery from COVID-19, many patients experience long-term sequelae known as post-COVID syndrome. The role of changes in the gut microbiota, particularly in relation to gastrointestinal symptoms following COVID-19, is of growing interest, although data on these changes in the post-COVID period remain controversial.Aim— to identify the main predictors of the absence of gastrointestinal symptoms in the post-COVID period in children using clinical, anamnestic, molecular biological, and immunological methods.Materials and methods. A database was created that included over 400 characteristics characterizing general information, clinical presentation, laboratory data, including procalcitonin and CRP levels, 16S microbiota sequencing, zonulin determination, stool PCR for SARS-Co V-2, and analysis of antibiotic and synbiotic prescriptions. The analysis was conducted in two groups of patients. Group 1 included 24 children who developed gastrointestinal symptoms one month after recovery, while Group 2 consisted of 23 patients who had no gastrointestinal symptoms.Results.Using a neural network, five features were identified that predict the absence of post-COVID gastrointestinal symptoms in children one month after recovery from novel coronavirus infection. The sensitivity of the neural network was 95.0%, specificity 87.5%, and accuracy 91.0%.Conclusion.The main predictors of the absence of gastrointestinal symptoms in the post-COVID period in children are the relative proportion of Actinobacteriota less than 0.24 in stool by 16S sequencing one month after recovery, the presence of Actinobacteria species less than 0.1 in stool by 16S sequencing one month after recovery, treatment with a synbiotic for 30 days, normal zonulin levels in stool, and the absence of a history of food allergies.

Author Biographies

Anna V. Polunina, Saint Petersburg State Pediatric Medical University

Cand. Sci. (Med.), Assistent, Department of Propaedeutics of Children’s Diseases with a course of general child care

Nikita A. Dementyev, Saint Petersburg State Pediatric Medical University

Lecturer, Department of Medical Informatics

Aleksandra A. Tikhomirova, Saint Petersburg State Pediatric Medical University

Cand. Sci. (Economics),Аssociate Professor, Head, Department of Medical Informatics

Mikhail A. Dokhov, Saint Petersburg State Pediatric Medical University

Cand. Sci. (Med.),Аssociate Professor, Department of Medical Informatics

Olga N. Varlamova, Saint Petersburg State Pediatric Medical University

Researcher, Laboratory of “Medical and Social Problems in Pediatrics”, Research Center

Alexander E. Blinov, Saint Petersburg State Pediatric Medical University

Senior Researcher, Laboratory of“Medical and Social Problems in Pediatrics”, Research Center

Vasilisa V. Dudurich, Cerba Lab Ltd

biologist-geneticis

Svetlana L. Bannova, Saint Petersburg State Pediatric Medical University

Cand. Sci. (Med.), Associate Professor, Department of Infectious Diseases in Children named after prof. M.G. Danilevich

Valeria P. Novikova, Saint Petersburg State Pediatric Medical University

Dr. Sci. (Med.), Professor, Head, Department of Propaedeutics of Children’s Diseases with a course of general child care, Head, Laboratory of “Medical and social problems in pediatrics”, Research Center

Aleksey L. Balashov, Saint Petersburg State Pediatric Medical University; City Polyclinic No. 56

Cand. Sci. (Med.), Associate Professor, Department of Propaedeutics of Children’s Diseases with a course of general child care, Saint Petersburg State Pediatric Medical University; Chief Physician, City Polyclinic No. 56

References

1. Косенкова Т.В., Тимченко В.Н., Баннова С.Л., Чернова Т.М., Шакмаева М.А., Булина О.В., Егорова И.А. Коронавирусная инфекция и COVID-19 у детей. Часть 1. Эпидемиология, этиология, патогенез. Children’s Medicine of the North-West. 2024;12(4):21–38. https://doi.org/10.56871/Cm N-W.2024.86.55.002.

2. Jin X., Lian J.S, Hu J.H., Gao J., Zheng L., Zhang Y.M. et al. Epidemiological, clinical and virological characteristics of 74 cases of coronavirus-infected disease 2019 (COVID-19) with gastrointestinal symptoms. Gut. 2020;69(6):1002–1009. https://doi.org/10.1136/gutjnl-2020-320926.

3. Lippi G., Sanchis-Gomar F., Henry B.M. COVID-19 and its long-term sequelae: what do we know in 2023? Pol Arch Intern Med. 2023;133(4):16402. https://doi.org/10.20452/pamw.16402.

4. Сидорова И.В., Симаходский А.С., Леонова И.А., Пеньков Д.Г. Клинические проявления последствий новой коронавирусной инфекции С OVID-19 у детей. Профилактическая и клиническая медицина. 2021;4(81):41–48. https://doi.org/10.47843/2074-9120_2021_4_41.

5. Newsome R.C., Gauthier J., Hernandez M.C., Abraham G.E., Robinson T.O., Williams H.B. et al. The gut microbiome of COVID-19 recovered patients returns to uninfected status in a minority-dominated United States cohort. Gut Microbes. 2021;13(1):1–15. https://doi.org/10.1080/19490976.2021.1926840.

6. Yeoh Y.K., Zuo T., Lui G.C., Zhang F., Liu Q., Li A.Y. et al. Gut microbiota composition reflects disease severity and dysfunctional immune responses in patients with COVID-19. Gut. 2021;70(4):698–706. https://doi.org/10.1136/gutjnl-2020-323020.

7. Obleagă C.V., Ahmet R.A.M., Florescu D.N. Post-COVID-19 enterocolitis — a cause of rebellious diarrhea, acute abdomen and liver failure. Rom J Morphol Embryol. 2023; 64(4):527–533. https://doi.org/10.47162/RJME.64.4.09.

8. Noviello D., Costantino A., Muscatello A. Functional gastrointestinal and somatoform symptoms five months after SARS Co V-2 infection: A controlled cohort study. Neurogastroenterol Motil. 2022;34(2):e14187. https://doi.org/10.1111/nmo.14187.

9. Weng J., Li Y., Li J. Gastrointestinal sequelae 90 days after discharge for COVID-19. Lancet Gastroenterol Hepatol. 2021;6(5):344–346. https://doi.org/10.1016/S2468-1253(21)00076-5.

10. Huang C., Huang L., Wang Y. 6-month consequences of COVID-19 in patients discharged from hospital: a cohort study. Lancet. 2021;397(10270):220–232. https://doi.org/10.1016/S0140-6736(20)32656-8.

11. Anaya J.M., Rojas M., Salinas M.L. Post-COVID syndrome. A case series and comprehensive review. Autoimmun Rev. 2021;20(11):102947. https://doi.org/10.1016/j.autrev.2021.102947.

12. Карасева А.А., Худякова А.Д., Гарбузова Е.В., Рагино Ю.И., Логвиненко И.И. Степени тяжести постковидного синдрома: систематический обзор. Архивъ внутренней медицины. 2023;13(6):422–435. https://doi.org/10.20514/2226-6704-2023-13-6-422-435. EDN: RLJOEE.

13. Налетов А.В., Каспир Д.В., Гуз Н.П., Бораева Т.Т. Оптимизация лечения синдрома раздраженного кишечника у пациентов, перенесших COVID-19. Архив клинической и экспериментальной медицины. 2021;30(4):314–316.

14. Marasco G., Cremon C., Barbaro M.R. Post COVID-19 irritable bowel syndrome. Gut. 2022:gutjnl-2022-328483. https://doi.org/10.1136/gutjnl-2022-328483.

15. Farsi F., Zonooz S.R., Ebrahimi Z. The Incidence of Post-infectious Irritable Bowel Syndrome, Anxiety, and Depression in Iranian Patients with Coronavirus Disease 2019 Pandemic: A Cross-Sectional Study. Turk J. Gastroenterol. 2022;33(12):1033–1042. https://doi.org/10.5152/tjg.2022.21651.

16. Austhof E., Bell M.L., Riddle M.S. Persisting gastrointestinal symptoms and post-infectious irritable bowel syndrome following SARS-Co V-2 infection results from the Arizona Co VHORT. Epidemiol Infect. 2022;150:e136. https://doi.org/10.1017/S0950268822001200.

17. Siyal M., Abbas Z., Ashraf J. Incidence and predisposing factors for de novo post-COVID-19 irritable bowel syndrome. Eur J Gastroenterol Hepatol. 2023;35:(1):59–63. https://doi.org/10.1097/MEG.0000000000002475.

18. Golla R., Vuyyuru S., Kante B. Long-term gastrointestinal sequelae following COVID-19: a prospective follow up cohort study. Clin Gastroenterol Hepatol. 2023;21(3):789–796.e1. https://doi.org/10.1016/j.cgh.2022.10.015.

19. Ghoshal U.C., Ghoshal U., Rahman M.M. Post-infection functional gastrointestinal disorders following coronavirus disease-19: a case-control study. J Gastroenterol Hepatol. 2022;37(3):489–498. https://doi.org/10.1111/jgh.15717.

20. Vélez C., Paz M., Silvernale C. Factors Associated With Chronic De Novo Post-Coronavirus Disease Gastrointestinal Disorders in a Metropolitan US County. Clin Gastroenterol Hepatol. 2022;20(6):e1488–e1492. https://doi.org/10.1016/j.cgh.2021.10.020.

21. Nazarewska A., Lewandowski K., Kaniewska M. Irritable bowel syndrome following COVID-19 an underestimated consequence of SARS-Co V-2 infection. Pol Arch Intern Med. 2022;132(11):16323. https://doi.org/10.20452/PAMW.16323.

22. Chan W.W., Grover M. The COVID-19 Pandemic and Post-Infection Irritable Bowel Syndrome: What Lies Ahead for Gastroenterologists. Clin Gastroenterol Hepatol. 2022;20(10):2195–2197. https://doi.org/10.1016/j.cgh.2022.05.044.

23. Settanni C.R., Ianiro G., Ponziani F.R. COVID-19 as a trigger of irritable bowel syndrome: a review of potential mechanisms. World J Gastroenterol. 2021;27(43):7433–7445 https://doi.org/10.3748/wjg.v27.i43.7433.

24. Malik J.A., Ahmed S., Yaseen Z. Association of SARS-Co V-2 and Polypharmacy with Gut-Lung Axis: From Pathogenesis to Treatment. ACS Omega. 2022;7(38):33651–33665. https://doi.org/10.1021/acsomega.2c02524.

25. Gutiérrez-Castrellón P., Gandara-Martí T., Abreu A.T., Abreu Y. Probiotic improves symptomatic and viral clearance in Covid19 outpatients: a randomized, quadruple-blinded, placebo-controlled trial. Gut Microbes. 2022;14(1):2018899. https://doi.org/10.1080/19490976.2021.2018899.

26. Tiwari S.K., Dicks L.M.T., Popov I.V. Probiotics at war against viruses: what is missing from the picture? Front Microbiol. 2020;11:1877. https://doi.org/10.3389/fmicb.2020.01877.

27. Guo Q., Goldenberg J.Z., Humphrey C. Probiotics for the prevention of pediatric antibiotic-associated diarrhea. Cochrane Database Syst Rev. 2019;4(4):CD004827. https://doi.org/10.1002/14651858.CD004827.pub5.

28. Kazemi A., Soltani S., Ghorabi S. Is probiotic and synbiotic supplementation effective on immune cells? A systematic review and meta-analysis of clinical trials. Food Rev Int. 2020;37(5):491–537. https://doi.org/10.1080/87559129.2019.1710748.

29. Методические рекомендации. Особенности клинических проявлений и лечения заболевания, вызванного новой коронавирусной инфекцией (COVID-19) у детей (версия 2, утверждено Минздравом РФ). URL: https://www.garant.ru/products/ipo/prime/doc/74232682/ (дата обращения: 15.12.2025).

30. Song J., Wu Y., Yin X. The causal links between gut microbiota and COVID-19: a Mendelian randomization study. J Med Virol. 2023;95(5):e28784. https://doi.org/10.1002/jmv.28784.

31. Zhang H., Zhou Z. Association of gut microbiota and dietary component intake with COVID-19: a mendelian randomization study. Clin Nutr. 2023;42(8):1308–1313. https://doi.org/10.1016/j.clnu.2023.06.017.

32. Листопадова А.П., Новикова В.П., Замятина Ю.Е. Биомаркер синдрома повышенной кишечной проницаемости зонулин у детей с атопическим дерматитом и хроническим гастродуоденитом. Профилактическая и клиническая медицина. 2024;1(90):33–36.

33. Клинические рекомендации. Синдром раздраженного кишечника. URL: https://cr.minzdrav.gov.ru/preview-cr/892_1 (дата обращения: 31.01.2025).

34. Silva J.T.C., Fonseca Neto O.C.L.D. Post-COVID-19 irritable bowel syndrome: an integrative review. Rev Col Bras Cir. 2023;50:e20233618. https://doi.org/10.1590/0100-6991e-20233618-en.